|
Home
Deposit Plasmids
Request Plasmids
Plasmid Tools
About Addgene
Browse > Patrick Aebischer > Szulc et al > pLVCT-tTR-KRAB
Plasmid 11643: pLVCT-tTR-KRAB
Gene/insert name: CAG promoters, GFP, tTR-KRAB, Tet-on
Insert size (bp): Unknown
Vector backbone: None  (Search Vector Database)
Type of vector: Mammalian expression,Lentiviral
Backbone size (bp): 12877
5' Sequencing primer: See map  (List of Sequencing Primers)
Bacteria resistance: Ampicillin
High or low copy: High Copy
Grow in standard E. coli @ 37C: No
Please specify bacterial strain for growth and growth condition: Use Stbl3 or HB101 to reduce chance of recombination. Grow at 37C
Sequence:View sequence
Author's Map:View map
Plasmid Provided In:Stbl3
Principal Investigator:Patrick Aebischer
Terms and Licenses:MTA

Comments: Transgenes can be expressed from any RNA Pol II promoter as part of bicistronic unit comprising the KRAB-based repressor; tetO sequences are inserted into the vector LTR. Tet-on and Tet-off versions rely on repressors that bind in the absence or the presence of doxycycline, respectively. Addition of Pol III promoter-small hairpin RNA cassette allows for drug-controllable RNA interference (Tet-on shRNA).

Cloning shRNA into pLVET, pLVCT, and pLVPT vectors: first clone shRNA into pLVTHM downstream of the tetO-H1 region. Then cut pLVTHM containing your shRNA with MscI-FspI and clone the insert containing the 3'LTR to target plasmid opened with MscI-FspI. FspI cuts into AmpR. This means for inverted clones AmpR will not be restored; after selection you will be left with clones with the shRNA cassette and functional AmpR.

pLVTHM and packaging plasmids for this system are also available at Addgene (http://www.addgene.org/rnaitools). Please visit the Trono lab website (http://tronolab.epfl.ch) to see frequently asked questions on cloning strategies and packaging. You may also visit LentiWeb (http://www.lentiweb.com) for discussions on cloning strategies and protocols.

Addgene has sequenced a portion of this plasmid for verification. Click here for the sequencing result.

Click on map to enlarge

Selected features
HIV-1_5_LTR 459 - 639
truncHIV-1_3_LTR 459 - 639
HIV-1_psi_pack 750 - 794
RRE 1304 - 1537
Orf frame 3 1182 - 2039
CAG_enhancer 2141 - 2428
Orf frame 3 3707 - 2796
pCAG_F_primer 3736 - 3755
cPPT 3818 - 3833
EGFP_N_primer 4081 - 4060
EGFP 4015 - 4731
Orf frame 1 4015 - 4764
EGFP_C_primer 4668 - 4689
IRES 4815 - 5318
TetR 5396 - 5995
Orf frame 2 5381 - 6388
WPRE 6463 - 7050
cPPT 7121 - 7136
U3PPT 7121 - 7142
TRE 7173 - 7460
HIV-1_5_LTR 7496 - 7676
truncHIV-1_3_LTR 7496 - 7676
Sp6_primer 7719 - 7702
pBRrevBam_primer 8028 - 8009
tet(564-300) 8220 - 7957
pGEX_3_primer 8361 - 8383
AmpR_promoter 8542 - 8570
Orf frame 2 8612 - 9472
Ampicillin 8612 - 9472
pBR322_origin 9627 - 10246
pBABE_3_primer 10492 - 10472
SV40_enhancer 10693 - 10478
SV40_promoter 10490 - 10758
SV40_origin 10657 - 10734
SV40_promoter 10610 - 10812
SV40pro_F_primer 10719 - 10738
SV40_int 11939 - 11954
SV40_3_splice 11960 - 12007
SV40_PA_terminator 12583 - 12714
EBV_rev_primer 12671 - 12690
Unique restriction sites

NotI 1149
BamHI 3969
SmaI 4795
PstI 4803
SalI 6020
MscI 7063
FspI 9176

Article: A versatile tool for conditional gene expression and knockdown. Szulc J et al. (Nat Methods. 2006 Feb . 3(2):109-16. Pubmed)

Please acknowledge the principal investigator and cite this article if you use this plasmid in a publication.

Also, please include the text "Addgene plasmid 11643" in your Materials and Methods section. This information allows Addgene to create a link from the plasmid page to your publication.

Home | Contact | Terms of Use | MTA and Licenses | Privacy Policy | Site Map © 2003-2007 Addgene, Inc. All Rights Reserved
Plasmid Cart
Your cart is empty.